Validator

Connection

Bases: Base

A single connection between two cells.

Parameters:

Name	Type	Description	Default
pre		The pre-synaptic cell	required
post		The post-synaptic cell	required
weight		The weight of the connection, which could be the number of synapses or a normalized value.	required

Source code in cect/validation/Validator.py

@modelspec.define
class Connection(Base):
    """
    A single connection between two cells.

    Args:
        pre: The pre-synaptic cell
        post: The post-synaptic cell
        weight: The weight of the connection, which could be the number of synapses or a normalized value.
    """

    pre: str = field(validator=instance_of(str))
    post: str = field(validator=instance_of(str))
    weight: float = field(validator=instance_of(float))

ConnectionList

Bases: Base

A model of a list of connections of a specific synapse type.

Parameters:

Name	Type	Description	Default
synapse		The type of synapse	required
comment		A comment about how the data was found, e.g. taken from a spreadsheet	required
connections		The list of connections of this type	required

Source code in cect/validation/Validator.py

@modelspec.define
class ConnectionList(Base):
    """
    A model of a list of connections of a specific synapse type.

    Args:
        synapse: The type of synapse
        comment: A comment about how the data was found, e.g. taken from a spreadsheet
        connections: The list of connections of this type
    """

    synapse: str = field(validator=instance_of(str))
    comment: str = field(validator=instance_of(str))
    connections: List[Connection] = field(factory=list)

ReaderExpectedData

Bases: Base

A model of expected data for a specific reader.

Parameters:

Name	Type	Description	Default
reader		The name of the reader	required
connection_lists		The list of connection lists for this reader	required

Source code in cect/validation/Validator.py

@modelspec.define
class ReaderExpectedData(Base):
    """
    A model of expected data for a specific reader.

    Args:
        reader: The name of the reader
        connection_lists: The list of connection lists for this reader
    """

    reader: str = field(validator=instance_of(str))
    connection_lists: List[ConnectionList] = field(factory=list)