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C. elegans
Connectome Toolbox
Analysis
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C. elegans
Connectome Toolbox
Overview
Comparison
Key publications
Key publications
Albertson & Thomson 1976
White et al. 1986
Durbin 1987
Hall & Russell 1991
Altun et al. 2009
Varshney et al. 2011
Jarrell et al. 2012
Serrano-Saiz et al. 2013
Pereira et al. 2015
Gendrel, Atlas & Hobert 2016
Bentley et al. 2016
Cook et al. 2019
Cook et al. 2020
Fenyves et al. 2020
Brittin et al. 2021
Taylor et al. 2021
Yemini et al. 2021
Witvliet et al. 2021
Beets et al. 2023
Dag et al. 2023
Atanas et al. 2023
Randi et al. 2023
Ripoll-Sánchez et al. 2023
Data sets
Data sets
White et al. 1986 - A (N2U)
White et al. 1986 - L4 (JSH)
White et al. 1986 - whole
Varshney et al. 2011
Bentley et al. 2016 Monoam.
Bentley et al. 2016 Peptid.
Cook et al. 2019 Herm
Cook et al. 2019 Male
Cook et al. 2020
Brittin et al. 2021
Witvliet et al. 2021 1 (L1)
Witvliet et al. 2021 2 (L1)
Witvliet et al. 2021 3 (L1)
Witvliet et al. 2021 4 (L1)
Witvliet et al. 2021 5 (L2)
Witvliet et al. 2021 6 (L3)
Witvliet et al. 2021 7 (adult)
Witvliet et al. 2021 8 (adult)
WormNeuroAtlas Anatomy
Randi et al. 2023
Ripoll-Sánchez 2023 (short)
Ripoll-Sánchez 2023 (mid)
Ripoll-Sánchez 2023 (long)
Test
Cells
Cells
All
C. elegans
cells
Individual neurons
Individual neurons
ADAL
ADAR
ADEL
ADER
ADFL
ADFR
ADLL
ADLR
AFDL
AFDR
AIAL
AIAR
AIBL
AIBR
AIML
AIMR
AINL
AINR
AIYL
AIYR
AIZL
AIZR
ALA
ALML
ALMR
ALNL
ALNR
AQR
AS1
AS10
AS11
AS2
AS3
AS4
AS5
AS6
AS7
AS8
AS9
ASEL
ASER
ASGL
ASGR
ASHL
ASHR
ASIL
ASIR
ASJL
ASJR
ASKL
ASKR
AUAL
AUAR
AVAL
AVAR
AVBL
AVBR
AVDL
AVDR
AVEL
AVER
AVFL
AVFR
AVG
AVHL
AVHR
AVJL
AVJR
AVKL
AVKR
AVL
AVM
AWAL
AWAR
AWBL
AWBR
AWCL
AWCR
BAGL
BAGR
BDUL
BDUR
CA01
CA02
CA03
CA04
CA05
CA06
CA07
CA08
CA09
CANL
CANR
CEMDL
CEMDR
CEMVL
CEMVR
CEPDL
CEPDR
CEPVL
CEPVR
CP01
CP02
CP03
CP04
CP05
CP06
CP07
CP08
CP09
DA1
DA2
DA3
DA4
DA5
DA6
DA7
DA8
DA9
DB1
DB2
DB3
DB4
DB5
DB6
DB7
DD1
DD2
DD3
DD4
DD5
DD6
DVA
DVB
DVC
DVE
DVF
DX1
DX2
DX3
EF1
EF2
EF3
FLPL
FLPR
HOA
HOB
HSNL
HSNR
I1L
I1R
I2L
I2R
I3
I4
I5
I6
IL1DL
IL1DR
IL1L
IL1R
IL1VL
IL1VR
IL2DL
IL2DR
IL2L
IL2R
IL2VL
IL2VR
LUAL
LUAR
M1
M2L
M2R
M3L
M3R
M4
M5
MCL
MCML
MCMR
MCR
MI
NSML
NSMR
OLLL
OLLR
OLQDL
OLQDR
OLQVL
OLQVR
PCAL
PCAR
PCBL
PCBR
PCCL
PCCR
PDA
PDB
PDC
PDEL
PDER
PGA
PHAL
PHAR
PHBL
PHBR
PHCL
PHCR
PHDL
PHDR
PLML
PLMR
PLNL
PLNR
PQR
PVCL
PVCR
PVDL
PVDR
PVM
PVNL
PVNR
PVPL
PVPR
PVQL
PVQR
PVR
PVT
PVV
PVWL
PVWR
PVX
PVY
PVZ
R1AL
R1AR
R1BL
R1BR
R2AL
R2AR
R2BL
R2BR
R3AL
R3AR
R3BL
R3BR
R4AL
R4AR
R4BL
R4BR
R5AL
R5AR
R5BL
R5BR
R6AL
R6AR
R6BL
R6BR
R7AL
R7AR
R7BL
R7BR
R8AL
R8AR
R8BL
R8BR
R9AL
R9AR
R9BL
R9BR
RIAL
RIAR
RIBL
RIBR
RICL
RICR
RID
RIFL
RIFR
RIGL
RIGR
RIH
RIML
RIMR
RIPL
RIPR
RIR
RIS
RIVL
RIVR
RMDDL
RMDDR
RMDL
RMDR
RMDVL
RMDVR
RMED
RMEL
RMER
RMEV
RMFL
RMFR
RMGL
RMGR
RMHL
RMHR
SAADL
SAADR
SAAVL
SAAVR
SABD
SABVL
SABVR
SDQL
SDQR
SIADL
SIADR
SIAVL
SIAVR
SIBDL
SIBDR
SIBVL
SIBVR
SMBDL
SMBDR
SMBVL
SMBVR
SMDDL
SMDDR
SMDVL
SMDVR
SPCL
SPCR
SPDL
SPDR
SPVL
SPVR
URADL
URADR
URAVL
URAVR
URBL
URBR
URXL
URXR
URYDL
URYDR
URYVL
URYVR
VA1
VA10
VA11
VA12
VA2
VA3
VA4
VA5
VA6
VA7
VA8
VA9
VB1
VB10
VB11
VB2
VB3
VB4
VB5
VB6
VB7
VB8
VB9
VC1
VC2
VC3
VC4
VC5
VC6
VD1
VD10
VD11
VD12
VD13
VD2
VD3
VD4
VD5
VD6
VD7
VD8
VD9
Individual muscles
Individual muscles
ailL
ailR
aobL
aobR
BWM
cdlL
cdlR
dglL1
dglL2
dglL3
dglL4
dglL5
dglL6
dglL7
dglR1
dglR2
dglR3
dglR4
dglR5
dglR6
dglR7
dglR8
dspL
dspR
dsrL
dsrR
gecL
gecR
grtL
grtR
MANAL
MDL01
MDL02
MDL03
MDL04
MDL05
MDL06
MDL07
MDL08
MDL09
MDL10
MDL11
MDL12
MDL13
MDL14
MDL15
MDL16
MDL17
MDL18
MDL19
MDL20
MDL21
MDL22
MDL23
MDL24
MDR01
MDR02
MDR03
MDR04
MDR05
MDR06
MDR07
MDR08
MDR09
MDR10
MDR11
MDR12
MDR13
MDR14
MDR15
MDR16
MDR17
MDR18
MDR19
MDR20
MDR21
MDR22
MDR23
MDR24
mu_anal
mu_intL
mu_intR
mu_sph
MVL01
MVL02
MVL03
MVL04
MVL05
MVL06
MVL07
MVL08
MVL09
MVL10
MVL11
MVL12
MVL13
MVL14
MVL15
MVL16
MVL17
MVL18
MVL19
MVL20
MVL21
MVL22
MVL23
MVR01
MVR02
MVR03
MVR04
MVR05
MVR06
MVR07
MVR08
MVR09
MVR10
MVR11
MVR12
MVR13
MVR14
MVR15
MVR16
MVR17
MVR18
MVR19
MVR20
MVR21
MVR22
MVR23
MVR24
MVULVA
pilL
pilR
pm1
pm2D
pm2VL
pm2VR
pm3D
pm3VL
pm3VR
pm4D
pm4VL
pm4VR
pm4_UNSPECIFIED
pm5D
pm5VL
pm5VR
pm6D
pm6VL
pm6VR
pm7D
pm7VL
pm7VR
pm8
pobL
pobR
polL
polR
um1AL
um1AR
um1PL
um1PR
um2AL
um2AR
um2PL
um2PR
vm1AL
vm1AR
vm1PL
vm1PR
vm2AL
vm2AR
vm2PL
vm2PR
vspL
vspR
vsrL
vsrR
Other cells
Other cells
bm
CEPshDL
CEPshDR
CEPshVL
CEPshVR
e2D
e2DL
e2DR
e2V
e2VL
e2VR
e3D
e3VL
e3VR
exc_cell
exc_gl
g1AL
g1AR
g1p
g1P
g2L
g2R
GLRDL
GLRDR
GLRL
GLRR
GLRVL
GLRVR
gonad
hmc
hyp
int
mc1DL
mc1DR
mc1V
mc2DL
mc2DR
mc2V
mc3DL
mc3DR
mc3V
proctodeum
R1shL
R1shR
R1stL
R1stR
R2shL
R2shR
R2stL
R2stR
R3shL
R3shR
R3stL
R3stR
R4shL
R4shR
R4stL
R4stR
R5shL
R5shR
R5stL
R5stR
R6shL
R6shR
R6stL
R6stR
R7shL
R7shR
R7stL
R7stR
R8shL
R8shR
R8stL
R8stR
R9shL
R9shR
R9stL
R9stR
Resources
Resources
Resources
Python package
Python package
Installation
API Reference
Help
Help
About & Contact
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Analysis
Analysis