Dataset: Ripoll Sanchez et al. 2023MidRange
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White_A White_L4 White_whole Varshney Bentley2016_MA Bentley2016_PEP Cook2019Herm Cook2019Male Cook2020 Brittin2021 Witvliet1 Witvliet2 Witvliet3 Witvliet4 Witvliet5 Witvliet6 Witvliet7 Witvliet8 WormNeuroAtlas Randi2023 RipollSanchezShortRange RipollSanchezMidRange RipollSanchezLongRange Yim2024 Yim2024NonNorm Wang2024Herm Wang2024Male OpenWormUnified Test SSData UpdSSData UpdSSData2 GleesonModel OlivaresModel
Dataset taken from RipollSanchez et al. 2023. Data extracted from 01022024_neuropeptide_connectome_mid_range_model.csv for mid range model of neuropedtidergic connectome. Python Reader: RipollSanchezMidRangeReader
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Raw Data - Neurons - Pharynx - Social Network - Escape Response Circuit - Cook 2019 Fig 3 - BrainMap A - BrainMap B - Locomotion 1 - Locomotion 2 - Locomotion 3 - Peptidergic Hubs - Nonpharyngeal Neurons (herm) - Sensory Neurons (somatic) - Motor Neurons (somatic) - Interneurons (somatic) -
A view of the dataset in a three-layer, modular residual network architecture as in Figure 4a of Brittin et al. 2021
Hive plot of that view, BrainmapA, is not possible, as it is the BrainMap view
BrainMap A (BrainmapA)
A view of the dataset in a three-layer, modular residual network architecture as in Figure 4a of Brittin et al. 2021
| Connection type | Total size | Values present | Nodes with pre connections | Nodes with post connections |
|---|---|---|---|---|
| Extrasynaptic | (15, 15) matrix | 210 non-zero entries, avg. weight: 403.5047619047619, sum: 84736.0 | Head/neck, L1_Anterior, L1_Avoidance, L1_Lateral, L1_Taxis, L2_Anterior, L2_Avoidance, L2_LatSub, L2_Taxis, L3_Anterior, L3_Avoidance, L3_LatSub, L3_Taxis, Pharynx, VNC | Head/neck, L1_Anterior, L1_Avoidance, L1_Lateral, L1_Taxis, L2_Anterior, L2_Avoidance, L2_LatSub, L2_Taxis, L3_Anterior, L3_Avoidance, L3_LatSub, L3_Taxis, Pharynx, VNC |