Dataset: SSData
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White_A White_L4 White_whole Varshney Bentley2016_MA Bentley2016_PEP Cook2019Herm Cook2019Male Cook2020 Brittin2021 Witvliet1 Witvliet2 Witvliet3 Witvliet4 Witvliet5 Witvliet6 Witvliet7 Witvliet8 WormNeuroAtlas Randi2023 RipollSanchezShortRange RipollSanchezMidRange RipollSanchezLongRange Yim2024 Yim2024NonNorm Wang2024Herm Wang2024Male OpenWormUnified Test SSData UpdSSData UpdSSData2 GleesonModel OlivaresModel
Data extracted from CElegansNeuronTables.xls for neuronal connectivity. Note: legacy dataset (based on White_whole) used in the past in OpenWorm. Only included here for reference! Do not use!. Python Reader: SpreadsheetDataReader
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Raw Data - Neurons - Pharynx - Social Network - Escape Response Circuit - Cook 2019 Fig 3 - BrainMap A - BrainMap B - Locomotion 1 - Locomotion 2 - Locomotion 3 - Peptidergic Hubs - Nonpharyngeal Neurons (herm) - Sensory Neurons (somatic) - Motor Neurons (somatic) - Motor Neurons and muscles - Interneurons (somatic) -
All hermaphrodite sensory neurons except those in the pharynx
Sensory Neurons (somatic) (SensorySomaticH)
All hermaphrodite sensory neurons except those in the pharynx
| Connection type | Total size | Values present | Nodes with pre connections | Nodes with post connections |
|---|---|---|---|---|
| Chemical | (83, 83) matrix | 120 non-zero entries Avg. weight: 2.208333 Sum of weights: 265.0 |
ADLL, ADLR, AFDR, ALML, ALMR, ALNR, AQR, ASEL, ASER, ASGL, ASHL, ASHR, ASIL, ASIR, ASJL, ASJR, ASKR, AVM, AWBL, AWBR, AWCL, AWCR, BAGL, DVA, FLPL, FLPR, IL1DL, IL1L, IL1R, IL1VL, IL1VR, IL2L, IL2R, OLLL, OLLR, OLQVL, OLQVR, PHAL, PHAR, PHCL, PHCR, PLMR, PVDR, PVM, SDQL, SDQR, URXL, URXR, URYVL, URYVR | ADEL, ADER, ADFL, ADFR, ADLL, AFDL, AFDR, ALML, AQR, ASEL, ASER, ASGR, ASHL, ASHR, ASKL, ASKR, AVM, AWAR, AWBL, AWCL, AWCR, BAGL, BAGR, CEPDL, CEPDR, CEPVL, CEPVR, DVA, FLPL, FLPR, IL1DL, IL1DR, IL1L, IL1R, IL1VL, IL1VR, IL2R, IL2VL, IL2VR, OLLR, OLQDL, OLQDR, OLQVL, OLQVR, PDEL, PDER, PHAL, PHAR, PHBL, PHBR, PHCL, PVDL, SDQL, URXL, URXR, URYDL, URYVL |
| Electrical | (83, 83) matrix | 74 non-zero entries Matrix is symmetric with 37 unique pairs Avg. weight: 1.216216 Sum of weights: 90.0 |
ADLL, ADLR, AFDL, AFDR, ALML, ALMR, ASHL, ASHR, ASIL, ASIR, ASJL, ASJR, ASKL, ASKR, AVM, AWAL, AWAR, AWBL, AWBR, BAGL, BAGR, CEPDL, CEPDR, CEPVL, CEPVR, FLPL, FLPR, IL1DL, IL1DR, IL1L, IL1R, IL1VL, IL1VR, IL2R, OLLL, OLLR, OLQDL, OLQDR, OLQVL, OLQVR, PDEL, PDER, PHAL, PHAR, PHBL, PHBR, PHCL, PHCR, PLML, PVM, SDQL, SDQR, URXR | ADLL, ADLR, AFDL, AFDR, ALML, ALMR, ASHL, ASHR, ASIL, ASIR, ASJL, ASJR, ASKL, ASKR, AVM, AWAL, AWAR, AWBL, AWBR, BAGL, BAGR, CEPDL, CEPDR, CEPVL, CEPVR, FLPL, FLPR, IL1DL, IL1DR, IL1L, IL1R, IL1VL, IL1VR, IL2R, OLLL, OLLR, OLQDL, OLQDR, OLQVL, OLQVR, PDEL, PDER, PHAL, PHAR, PHBL, PHBR, PHCL, PHCR, PLML, PVM, SDQL, SDQR, URXR |
| Extrasynaptic | (83, 83) matrix | 59 non-zero entries Avg. weight: 3.423729 Sum of weights: 202.0 |
ADEL, ADER, ADFL, ADFR, AWAL, AWAR, CEPDL, CEPDR, CEPVL, CEPVR, IL2DL, IL2DR, IL2VL, IL2VR, PDEL, PDER, PHBL, PHBR | ADEL, ADER, ADFR, ADLL, AFDL, AFDR, ASEL, ASER, ASGL, ASGR, ASHR, AWBL, AWBR, BAGR, CEPDL, CEPDR, DVA, FLPL, FLPR, IL1DL, IL1DR, IL1L, IL1R, IL1VL, IL1VR, IL2L, IL2VR, OLLL, OLLR, OLQDL, OLQDR, OLQVL, OLQVR, PDER, PHBL, PHBR, PVM, URXR, URYDL, URYDR |
| Acetylcholine | (83, 83) matrix | 15 non-zero entries Avg. weight: 2.466667 Sum of weights: 37.0 |
ALNR, IL2L, IL2R, SDQL, SDQR | ADEL, ADER, ADLL, ALML, DVA, FLPL, IL1L, IL1R, OLLR, OLQDL, OLQDR, OLQVL, OLQVR, URXL |
| FMRFamide | (83, 83) matrix | 16 non-zero entries Avg. weight: 1.750000 Sum of weights: 28.0 |
ADLL, ADLR, ASEL, ASER | ADFR, AFDL, AFDR, ASER, ASHL, ASHR, AWAR, AWBL, AWCL, AWCR, OLLR, OLQVL |
| GABA | (83, 83) matrix | 2 non-zero entries Avg. weight: 3.500000 Sum of weights: 7.0 |
DVA | AQR, PDEL |
| Glutamate | (83, 83) matrix | 87 non-zero entries Avg. weight: 2.218391 Sum of weights: 193.0 |
AFDR, ALML, ALMR, AQR, ASGL, ASHL, ASHR, ASIL, ASIR, ASJL, ASJR, ASKR, AVM, AWBL, AWBR, AWCL, AWCR, BAGL, FLPL, FLPR, IL1DL, IL1L, IL1R, IL1VL, IL1VR, OLLL, OLLR, OLQVL, OLQVR, PHAL, PHAR, PHCL, PHCR, PLMR, PVDR, PVM, URXL, URXR, URYVL, URYVR | ADEL, ADER, ADFL, ADFR, ASEL, ASER, ASGR, ASHL, ASHR, ASKL, ASKR, AVM, AWAR, AWCL, AWCR, BAGL, BAGR, CEPDL, CEPDR, CEPVL, CEPVR, DVA, FLPL, FLPR, IL1DL, IL1DR, IL1L, IL1R, IL1VL, IL1VR, IL2R, IL2VL, IL2VR, OLQVR, PDEL, PDER, PHAL, PHAR, PHBL, PHBR, PHCL, PVDL, SDQL, URXL, URXR, URYDL, URYVL |
| Dopamine | (83, 83) matrix | 33 non-zero entries Avg. weight: 4.121212 Sum of weights: 136.0 |
ADEL, ADER, CEPDL, CEPDR, CEPVL, CEPVR, PDEL, PDER | ADEL, ADER, ADLL, ASGR, CEPDL, CEPDR, DVA, FLPL, FLPR, IL1DL, IL1DR, IL1L, IL1R, IL1VL, IL1VR, IL2L, IL2VR, OLLL, OLLR, OLQDL, OLQDR, OLQVL, OLQVR, PDER, PVM, URYDL, URYDR |
| Serotonin | (83, 83) matrix | 26 non-zero entries Avg. weight: 2.538462 Sum of weights: 66.0 |
ADFL, ADFR, AWAL, AWAR, IL2DL, IL2DR, IL2VL, IL2VR, PHBL, PHBR | ADFR, AFDL, AFDR, ASEL, ASER, ASGL, ASHR, AWBL, AWBR, BAGR, CEPDR, IL1DL, IL1DR, IL1VL, IL1VR, IL2L, OLQDL, OLQVL, OLQVR, PHBL, PHBR, URXR |
| Nodes in current view (83 total) xxxxxxxxxxxxxxxxxxxxxxxxx |
Num cells in node (83 total) |
Num in this dataset (83 total) |
Cells in node |
|---|---|---|---|
| ADEL | 1 | 1 | ADEL |
| ADER | 1 | 1 | ADER |
| ADFL | 1 | 1 | ADFL |
| ADFR | 1 | 1 | ADFR |
| ADLL | 1 | 1 | ADLL |
| ADLR | 1 | 1 | ADLR |
| AFDL | 1 | 1 | AFDL |
| AFDR | 1 | 1 | AFDR |
| ALML | 1 | 1 | ALML |
| ALMR | 1 | 1 | ALMR |
| ALNL | 1 | 1 | ALNL |
| ALNR | 1 | 1 | ALNR |
| AQR | 1 | 1 | AQR |
| ASEL | 1 | 1 | ASEL |
| ASER | 1 | 1 | ASER |
| ASGL | 1 | 1 | ASGL |
| ASGR | 1 | 1 | ASGR |
| ASHL | 1 | 1 | ASHL |
| ASHR | 1 | 1 | ASHR |
| ASIL | 1 | 1 | ASIL |
| ASIR | 1 | 1 | ASIR |
| ASJL | 1 | 1 | ASJL |
| ASJR | 1 | 1 | ASJR |
| ASKL | 1 | 1 | ASKL |
| ASKR | 1 | 1 | ASKR |
| AVM | 1 | 1 | AVM |
| AWAL | 1 | 1 | AWAL |
| AWAR | 1 | 1 | AWAR |
| AWBL | 1 | 1 | AWBL |
| AWBR | 1 | 1 | AWBR |
| AWCL | 1 | 1 | AWCL |
| AWCR | 1 | 1 | AWCR |
| BAGL | 1 | 1 | BAGL |
| BAGR | 1 | 1 | BAGR |
| CEPDL | 1 | 1 | CEPDL |
| CEPDR | 1 | 1 | CEPDR |
| CEPVL | 1 | 1 | CEPVL |
| CEPVR | 1 | 1 | CEPVR |
| DVA | 1 | 1 | DVA |
| FLPL | 1 | 1 | FLPL |
| FLPR | 1 | 1 | FLPR |
| IL1DL | 1 | 1 | IL1DL |
| IL1DR | 1 | 1 | IL1DR |
| IL1L | 1 | 1 | IL1L |
| IL1R | 1 | 1 | IL1R |
| IL1VL | 1 | 1 | IL1VL |
| IL1VR | 1 | 1 | IL1VR |
| IL2DL | 1 | 1 | IL2DL |
| IL2DR | 1 | 1 | IL2DR |
| IL2L | 1 | 1 | IL2L |
| IL2R | 1 | 1 | IL2R |
| IL2VL | 1 | 1 | IL2VL |
| IL2VR | 1 | 1 | IL2VR |
| OLLL | 1 | 1 | OLLL |
| OLLR | 1 | 1 | OLLR |
| OLQDL | 1 | 1 | OLQDL |
| OLQDR | 1 | 1 | OLQDR |
| OLQVL | 1 | 1 | OLQVL |
| OLQVR | 1 | 1 | OLQVR |
| PDEL | 1 | 1 | PDEL |
| PDER | 1 | 1 | PDER |
| PHAL | 1 | 1 | PHAL |
| PHAR | 1 | 1 | PHAR |
| PHBL | 1 | 1 | PHBL |
| PHBR | 1 | 1 | PHBR |
| PHCL | 1 | 1 | PHCL |
| PHCR | 1 | 1 | PHCR |
| PLML | 1 | 1 | PLML |
| PLMR | 1 | 1 | PLMR |
| PLNL | 1 | 1 | PLNL |
| PLNR | 1 | 1 | PLNR |
| PQR | 1 | 1 | PQR |
| PVDL | 1 | 1 | PVDL |
| PVDR | 1 | 1 | PVDR |
| PVM | 1 | 1 | PVM |
| SDQL | 1 | 1 | SDQL |
| SDQR | 1 | 1 | SDQR |
| URXL | 1 | 1 | URXL |
| URXR | 1 | 1 | URXR |
| URYDL | 1 | 1 | URYDL |
| URYDR | 1 | 1 | URYDR |
| URYVL | 1 | 1 | URYVL |
| URYVR | 1 | 1 | URYVR |