Dataset: Varshney et al. 2011
A corrected and extended version of the White et al. 1986 chemical and electrical wiring diagram, incorporating original Mind of a Worm data, Durbin's unpublished reconstructions, new EM imaging of previously unimaged dorsal cord regions, and over 3,000 synapse additions or corrections, particularly in the ventral cord motor neuron connectivity. Excludes pharyngeal neurons, but includes neuromuscular junction connections, all to one BWM (body wall muscle cell).
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WhiteN2U WhiteJSH White_whole Varshney Bentley2016_MA Bentley2016_PEP Cook2019Herm Cook2019Male Cook2020 Brittin2021 Witvliet1 Witvliet2 Witvliet3 Witvliet4 Witvliet5 Witvliet6 Witvliet7 Witvliet8 WormNeuroAtlas Randi2023 RipollSanchezShortRange RipollSanchezMidRange RipollSanchezLongRange Yim2024 Yim2024NonNorm Wang2024Herm Wang2024Male OpenWormUnified Test SSData UpdSSData UpdSSData2 HaspelODonovan HaspelODonovan1Seg GleesonModel OlivaresModel
Dataset taken from Varshney et al. 2011. Data extracted from NeuronConnect.xls for neuronal connectivity. Python Reader: VarshneyDataReader
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Raw Data - Neurons - Pharynx - Social Network - Escape Response Circuit - Cook 2019 Fig 3 - BrainMap A - BrainMap B - Locomotion 1 - Locomotion 2 - Locomotion 3 - Peptidergic Hubs - Nonpharyngeal Neurons (herm) - Sensory Neurons (somatic) - Motor Neurons (somatic) - Motor Neurons and muscles - Interneurons (somatic) -
Only the 20 neurons of the pharynx (whether present or not in the connectome dataset)
No connections present in this view
Pharynx (Pharynx)
Only the 20 neurons of the pharynx (whether present or not in the connectome dataset)
| Connection type | Total size | Values present | Nodes with pre connections | Nodes with post connections |
|---|---|---|---|---|
| Nodes in current view (20 total) xxxxxxxxxxxxxxxxxxxxxxxxx |
Num cells in node (20 total) |
Num in this dataset (0 total) |
Cells in node |
|---|---|---|---|
| I1L | 1 | 0 | I1L |
| I1R | 1 | 0 | I1R |
| I2L | 1 | 0 | I2L |
| I2R | 1 | 0 | I2R |
| I3 | 1 | 0 | I3 |
| I4 | 1 | 0 | I4 |
| I5 | 1 | 0 | I5 |
| I6 | 1 | 0 | I6 |
| M1 | 1 | 0 | M1 |
| M2L | 1 | 0 | M2L |
| M2R | 1 | 0 | M2R |
| M3L | 1 | 0 | M3L |
| M3R | 1 | 0 | M3R |
| M4 | 1 | 0 | M4 |
| M5 | 1 | 0 | M5 |
| MCL | 1 | 0 | MCL |
| MCR | 1 | 0 | MCR |
| MI | 1 | 0 | MI |
| NSML | 1 | 0 | NSML |
| NSMR | 1 | 0 | NSMR |
Validation tests: See here