Dataset: Ripoll Sanchez et al. 2023 (long range)
Dataset of neuropeptidergic connections between any neuron pair regardless of anatomical location
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WhiteN2U WhiteJSH White_whole Varshney Bentley2016_MA Bentley2016_PEP Cook2019Herm Cook2019Male Cook2020 Brittin2021 Witvliet1 Witvliet2 Witvliet3 Witvliet4 Witvliet5 Witvliet6 Witvliet7 Witvliet8 WormNeuroAtlas Randi2023 RipollSanchezShortRange RipollSanchezMidRange RipollSanchezLongRange Yim2024 Yim2024NonNorm Wang2024Herm Wang2024Male OpenWormUnified Test SSData UpdSSData UpdSSData2 HaspelODonovan HaspelODonovan1Seg GleesonModel OlivaresModel
Dataset taken from RipollSanchez et al. 2023. Data extracted from 01022024_neuropeptide_connectome_long_range_model.csv for long range model of neuropedtidergic connectome. Python Reader: RipollSanchezLongRangeReader
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Raw Data Neurons Pharynx Social Network Escape Response Circuit Cook 2019 Fig 3 BrainMap A BrainMap B Locomotion 1 Locomotion 2 Locomotion 3 Peptidergic Hubs Nonpharyngeal Neurons (herm) Sensory Neurons (somatic) Motor Neurons (somatic) Motor Neurons and muscles Interneurons (somatic)
A view of the data set with neurons grouped as in Figure 3 of Cook et al. 2019
Cook 2019 Fig 3 (Full1)
A view of the data set with neurons grouped as in Figure 3 of Cook et al. 2019
| Connection type | Total size | Values present | Nodes with pre connections | Nodes with post connections |
|---|---|---|---|---|
| Extrasynaptic | (17, 17) matrix | 221 non-zero entries 15 nodes with self-connections Avg. weight: 586.085973 Sum of weights: 129525.0 |
HMN, HSN, IN1, IN2, IN3, IN4, MNVC, SMN, SN1, SN2, SN3, SN4, SN5, SN6, VC | HMN, HSN, IN1, IN2, IN3, IN4, MNVC, SMN, SN1, SN2, SN3, SN4, SN5, SN6, VC |
Weight definition: Weights indicate the number of different NPP-GPCR pathways connecting a neuron pair in a given direction.
Validation tests: See here