Dataset: Varshney et al. 2011

A corrected and extended version of the White et al. 1986 chemical and electrical wiring diagram, incorporating original Mind of a Worm data, Durbin's unpublished reconstructions, new EM imaging of previously unimaged dorsal cord regions, and over 3,000 synapse additions or corrections, particularly in the ventral cord motor neuron connectivity. Excludes pharyngeal neurons, but includes neuromuscular junction connections, all to one BWM (body wall muscle cell).

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WhiteN2U WhiteJSH White_whole Varshney Bentley2016_MA Bentley2016_PEP Cook2019Herm Cook2019Male Cook2020 Brittin2021 Witvliet1 Witvliet2 Witvliet3 Witvliet4 Witvliet5 Witvliet6 Witvliet7 Witvliet8 WormNeuroAtlas Randi2023 RipollSanchezShortRange RipollSanchezMidRange RipollSanchezLongRange Yim2024 Yim2024NonNorm Wang2024Herm Wang2024Male OpenWormUnified Test SSData UpdSSData UpdSSData2 HaspelODonovan HaspelODonovan1Seg GleesonModel OlivaresModel

Dataset taken from Varshney et al. 2011. Data extracted from NeuronConnect.xls for neuronal connectivity. Python Reader: VarshneyDataReader

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Graph - Matrix - Hive plot - Symmetry

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Raw Data - Neurons - Pharynx - Social Network - Escape Response Circuit - Cook 2019 Fig 3 - BrainMap A - BrainMap B - Locomotion 1 - Locomotion 2 - Locomotion 3 - Peptidergic Hubs - Nonpharyngeal Neurons (herm) - Sensory Neurons (somatic) - Motor Neurons (somatic) - Motor Neurons and muscles - Interneurons (somatic) -

Escape Response Circuit from Pirri & Alkema, 2013

ChemicalElectricalView info

Symmetry graph of that view, Escape, is not possible, as it contains nodes with multiple cells

Escape Response Circuit (Escape)

Escape Response Circuit from Pirri & Alkema, 2013

Connection type	Total size	Values present	Nodes with pre connections	Nodes with post connections
Chemical	(15, 15) matrix	56 non-zero entries 8 nodes with self-connections Avg. weight: 24.517857 Sum of weights: 1373.0	ALM, AVA, AVB, AVD, AVM, PLM, PVC, PVM, RIM, RMD, SMD, VA/DA, VB/DB	AVA, AVB, AVD, AVM, Body Musc, PVC, RIM, RMD, SMD, VA/DA, VB/DB
Electrical	(15, 15) matrix	35 non-zero entries 7 nodes with self-connections Matrix is symmetric with 21 unique pairs (total unique pair weight: 332.0) Avg. weight: 15.800000 Sum of weights: 553.0	ALM, AVA, AVB, AVD, AVM, PLM, PVC, RIM, RMD, SMD, VA/DA, VB/DB	ALM, AVA, AVB, AVD, AVM, PLM, PVC, RIM, RMD, SMD, VA/DA, VB/DB

Nodes in current view (15 total) xxxxxxxxxxxxxxxxxxxxxxxxx	Num cells in node (161 total)	Num in this dataset (66 total)	Cells in node
ALM	2	2	ALML, ALMR
AVA	2	2	AVAL, AVAR
AVB	2	2	AVBL, AVBR
AVD	2	2	AVDL, AVDR
AVM	1	1	AVM
Body Musc	68	1	BWM, MDL08, MDL09, MDL10, MDL11, MDL12, MDL13, MDL14, MDL15, MDL16, MDL17, MDL18, MDL19, MDL20, MDL21, MDL22, MDL23, MDL24, MDR08, MDR09, MDR10, MDR11, MDR12, MDR13, MDR14, MDR15, MDR16, MDR17, MDR18, MDR19, MDR20, MDR21, MDR22, MDR23, MDR24, MVL08, MVL09, MVL10, MVL11, MVL12, MVL13, MVL14, MVL15, MVL16, MVL17, MVL18, MVL19, MVL20, MVL21, MVL22, MVL23, MVR08, MVR09, MVR10, MVR11, MVR12, MVR13, MVR14, MVR15, MVR16, MVR17, MVR18, MVR19, MVR20, MVR21, MVR22, MVR23, MVR24
Head Musc	28	0	MDL01, MDL02, MDL03, MDL04, MDL05, MDL06, MDL07, MDR01, MDR02, MDR03, MDR04, MDR05, MDR06, MDR07, MVL01, MVL02, MVL03, MVL04, MVL05, MVL06, MVL07, MVR01, MVR02, MVR03, MVR04, MVR05, MVR06, MVR07
PLM	2	2	PLML, PLMR
PVC	2	2	PVCL, PVCR
PVM	1	1	PVM
RIM	2	2	RIML, RIMR
RMD	6	6	RMDDL, RMDDR, RMDL, RMDR, RMDVL, RMDVR
SMD	4	4	SMDDL, SMDDR, SMDVL, SMDVR
VA/DA	21	21	DA1, DA2, DA3, DA4, DA5, DA6, DA7, DA8, DA9, VA1, VA10, VA11, VA12, VA2, VA3, VA4, VA5, VA6, VA7, VA8, VA9
VB/DB	18	18	DB1, DB2, DB3, DB4, DB5, DB6, DB7, VB1, VB10, VB11, VB2, VB3, VB4, VB5, VB6, VB7, VB8, VB9

Validation tests: See here

Neurons (herm) (280)

Full list of Neurons (hermaphrodite only) in this dataset

Missing neurons (22)

Full list of Missing neurons (known hermaphrodite neurons not present)

CANL | CANR | I1L | I1R | I2L | I2R | I3 | I4 | I5 | I6 | M1 | M2L | M2R | M3L | M3R | M4 | M5 | MCL | MCR | MI | NSML | NSMR

Muscles (1)

Full list of Muscles in this dataset

BWM

Dataset: Varshney et al. 2011

Neurons (herm) (280)

Missing neurons (22)

Muscles (1)

Other cells (0)