Dataset: Ripoll Sanchez et al. 2023 (mid range)
Dataset of neuropeptidergic connections between any neurons whose processes lie within the same broad body region (head, midbody, or tail)
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WhiteN2U WhiteJSH White_whole Varshney Bentley2016_MA Bentley2016_PEP Cook2019Herm Cook2019Male Cook2020 Brittin2021 Witvliet1 Witvliet2 Witvliet3 Witvliet4 Witvliet5 Witvliet6 Witvliet7 Witvliet8 WormNeuroAtlas Randi2023 RipollSanchezShortRange RipollSanchezMidRange RipollSanchezLongRange Yim2024 Yim2024NonNorm Wang2024Herm Wang2024Male OpenWormUnified Test SSData UpdSSData UpdSSData2 HaspelODonovan HaspelODonovan1Seg GleesonModel OlivaresModel
Dataset taken from RipollSanchez et al. 2023. Data extracted from 01022024_neuropeptide_connectome_mid_range_model.csv for mid range model of neuropedtidergic connectome. Python Reader: RipollSanchezMidRangeReader
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Raw Data - Neurons - Pharynx - Social Network - Escape Response Circuit - Cook 2019 Fig 3 - BrainMap A - BrainMap B - Locomotion 1 - Locomotion 2 - Locomotion 3 - Peptidergic Hubs - Nonpharyngeal Neurons (herm) - Sensory Neurons (somatic) - Motor Neurons (somatic) - Motor Neurons and muscles - Interneurons (somatic) -
Escape Response Circuit from Pirri & Alkema, 2013
Escape Response Circuit (Escape)
Escape Response Circuit from Pirri & Alkema, 2013
| Connection type | Total size | Values present | Nodes with pre connections | Nodes with post connections |
|---|---|---|---|---|
| Extrasynaptic | (15, 15) matrix | 155 non-zero entries 13 nodes with self-connections Avg. weight: 87.406452 Sum of weights: 13548.0 |
ALM, AVA, AVB, AVD, AVM, PLM, PVC, PVM, RIM, RMD, SMD, VA/DA, VB/DB | ALM, AVA, AVB, AVD, AVM, PLM, PVC, PVM, RIM, RMD, SMD, VA/DA, VB/DB |
Validation tests: See here